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Avogadro

Advanced molecular editor

The Avogadro team

org.openchemistry.Avogadro2
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Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.

Core features and goals of the Avogadro project include:

  • Open-source, distributed under the liberal 3-clause BSD license
  • Cross-platform, with nightly builds on Linux, Mac OS X and Windows
  • An intuitive interface designed to be useful to whole community
  • Fast and efficient, embracing the latest technologies
  • Extensible, making extensive use of a plugin architecture
  • Flexible, supporting a range of chemical data formats and packages

Screenshots

Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot
Avogadro screenshot

Observed history

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Upstream releases

Release notes supplied by the developer. These dates are not Flathub package publication times.

2.0.01 Apr 2026

Highlights

  • New plugin system will load menu commands, input generators, file formats, energy and electrostatic models, including installation of any required libraries and tools using [`pixi`](https://pixi.prefix.dev/latest/installation/) on Mac and Windows. (Highly recommended on Linux too)
  • New plugin install window and index, including over 20 plugins (and growing)
  • Faster geometry optimizations ~50% faster on all models, and up to 5-10x faster on large molecules using UFF.
  • Added a faster protocol for using external energy models, including ML potentials, XTB, and more.
  • Added a simple molecular dynamics mode to the AutoOpt tool, including with energy models.
  • Improved ORCA input generator, including syntax highlighting
1.103.06 Feb 2026

Highlights

  • Switch to use OpenGL 4.0 core profile for improved rendering speed
  • Volumetric rendering style for surfaces (orbitals, electron density, spin density)
  • Add peptide builder
  • Add keyboard shortcuts for functional groups and ligands to template tool
  • Display both alpha / beta orbitals in the orbital window
  • Performance optimizations for basis set calculations
  • Improved heuristics for opening CIF and crystallographic files
  • Update conformer plots for RMSD and energy
  • Support for isotope specification for atoms
  • Improved LAMMPS and Turbomole support
1.102.127 Oct 2025

Highlights

  • This release fixes a number of bugs in the recent 1.102.0 release.
1.102.023 Oct 2025

Highlights

  • This release is intended as a final beta before a 2.0 stable release
  • Add the popular auto optimize tool
  • Updated charts, including spectra using the JKQtPlotter framework
  • Use `pixi` if available to install Python and plugins
  • A pile of bug fixes, updated language translations, and more